--- name: meta-results-risk-of-bias description: Generates the "Risk of Bias" results section for a meta-analysis based on assessment tables and statistics. Use when the user wants to draft the risk of bias analysis text from provided data tables. license: MIT author: aipoch --- > **Source**: [https://github.com/aipoch/medical-research-skills](https://github.com/aipoch/medical-research-skills) ## When to Use - Use this skill when the request matches its documented task boundary. - Use it when the user can provide the required inputs and expects a structured deliverable. - Prefer this skill for repeatable, checklist-driven execution rather than open-ended brainstorming. ## Key Features - Scope-focused workflow aligned to: Generates the "Risk of Bias" results section for a meta-analysis based on assessment tables and statistics. Use when the user wants to draft the risk of bias analysis text from provided data tables. - Packaged executable path(s): `scripts/format_result.py` plus 1 additional script(s). - Structured execution path designed to keep outputs consistent and reviewable. ## Dependencies - `Python`: `3.10+`. Repository baseline for current packaged skills. - `Third-party packages`: `not explicitly version-pinned in this skill package`. Add pinned versions if this skill needs stricter environment control. ## Example Usage ```bash cd "20260316/scientific-skills/Academic Writing/meta-results-risk-of-bias" python -m py_compile scripts/format_result.py python scripts/format_result.py --help ``` Example run plan: 1. Confirm the user input, output path, and any required config values. 2. Edit the in-file `CONFIG` block or documented parameters if the script uses fixed settings. 3. Run `python scripts/format_result.py` with the validated inputs. 4. Review the generated output and return the final artifact with any assumptions called out. ## Implementation Details See `## Workflow` above for related details. - Execution model: validate the request, choose the packaged workflow, and produce a bounded deliverable. - Input controls: confirm the source files, scope limits, output format, and acceptance criteria before running any script. - Primary implementation surface: `scripts/format_result.py` with additional helper scripts under `scripts/`. - Parameters to clarify first: input path, output path, scope filters, thresholds, and any domain-specific constraints. - Output discipline: keep results reproducible, identify assumptions explicitly, and avoid undocumented side effects. ## Validation Shortcut Run this minimal command first to verify the supported execution path: ```bash python scripts/format_result.py --help ``` # Risk of Bias Results Generator This skill generates a professional, academic "Risk of Bias" results section for a meta-analysis. It analyzes the provided statistics and detailed assessment table, drafts the text using a clinical expert persona, and automatically formats the output with necessary figure citations. ## When to Use This Skill Use this skill when the user provides: 1. **Title**: The title of the meta-analysis. 2. **Language**: Target language (Chinese or English). 3. **Statistics**: A summary table of bias risk assessment. 4. **Detailed Assessment Table**: Detailed scores for each study across domains (D1-D5). And asks for: - A draft of the "Results" section regarding risk of bias. - An analysis of the bias risk. ## Workflow 1. **Draft Text**: Analyze the input tables and draft an academic summary (>300 words). - Summarize overall risk (High, Some concerns, Low). - Analyze each domain (D1-D5) specifically. - Use specific numbers from the statistics table. 2. **Format Output**: Automatically insert the figure citation `(Figure 1)` before the last punctuation and append the figure caption. ## Usage Instructions ### 1. Draft the Content Use the following prompt to generate the initial text: **Role**: Clinical Medical Expert **Task**: Write an academic "Results" section based on the following inputs: - **Title**: {{title}} - **Detailed Assessment Table**: {{Detailed_Assessment_Table}} - **Statistics**: {{statistics}} **Requirements**: 1. Explicitly state the total number of studies evaluated. 2. First, summarize the **Overall bias risk** (High, Some concerns, Low). 3. Then, **analyze each domain (D1-D5)** specifically. 4. Use **specific numbers** from the statistics table. 5. Maintain a professional, objective, academic style. 6. Length: >300 words. 7. Language: {{language}} ### 2. Format the Result Run the formatting script to insert the figure citation and caption. ```bash python scripts/format_result.py --text "" --language "{{language}}" ``` ## Tools and Scripts - `scripts/format_result.py`: Inserts `(Figure 1)` and appends the figure placeholder and caption. ## When Not to Use - Do not use this skill when the required source data, identifiers, files, or credentials are missing. - Do not use this skill when the user asks for fabricated results, unsupported claims, or out-of-scope conclusions. - Do not use this skill when a simpler direct answer is more appropriate than the documented workflow. ## Required Inputs - A clearly specified task goal aligned with the documented scope. - All required files, identifiers, parameters, or environment variables before execution. - Any domain constraints, formatting requirements, and expected output destination if applicable. ## Output Contract - Return a structured deliverable that is directly usable without reformatting. - If a file is produced, prefer a deterministic output name such as `meta_results_risk_of_bias_result.md` unless the skill documentation defines a better convention. - Include a short validation summary describing what was checked, what assumptions were made, and any remaining limitations. ## Validation and Safety Rules - Validate required inputs before execution and stop early when mandatory fields or files are missing. - Do not fabricate measurements, references, findings, or conclusions that are not supported by the provided source material. - Emit a clear warning when credentials, privacy constraints, safety boundaries, or unsupported requests affect the result. - Keep the output safe, reproducible, and within the documented scope at all times. ## Failure Handling - If validation fails, explain the exact missing field, file, or parameter and show the minimum fix required. - If an external dependency or script fails, surface the command path, likely cause, and the next recovery step. - If partial output is returned, label it clearly and identify which checks could not be completed. ## Quick Validation Run this minimal verification path before full execution when possible: ```bash python scripts/format_result.py --help ``` Expected output format: ```text Result file: meta_results_risk_of_bias_result.md Validation summary: PASS/FAIL with brief notes Assumptions: explicit list if any ``` ## Deterministic Output Rules - Use the same section order for every supported request of this skill. - Keep output field names stable and do not rename documented keys across examples. - If a value is unavailable, emit an explicit placeholder instead of omitting the field. ## Completion Checklist - Confirm all required inputs were present and valid. - Confirm the supported execution path completed without unresolved errors. - Confirm the final deliverable matches the documented format exactly. - Confirm assumptions, limitations, and warnings are surfaced explicitly.